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1K9Y

The PAPase Hal2p complexed with magnesium ions and reaction products: AMP and inorganic phosphate

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date1999-08-08
DetectorRIGAKU RAXIS
Wavelength(s)1.5418
Spacegroup nameP 1 21 1
Unit cell lengths54.693, 45.075, 71.794
Unit cell angles90.00, 110.96, 90.00
Refinement procedure
Resolution20.000

*

- 1.900
R-factor0.151

*

Rwork0.156
R-free0.20500

*

Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1qgx
RMSD bond length0.021

*

RMSD bond angle3.200

*

Data reduction softwareMOSFLM
Data scaling softwareSCALA
Refinement softwareREFMAC (5.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.000

*

1.949
High resolution limit [Å]1.9001.900
Rmerge0.090

*

0.410

*

Number of reflections25897
Completeness [%]99.0

*

97

*

Redundancy3.2

*

Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.529330 % PEG5000 MME, 0.1 M sodium acetate, 5 mM beta-mercaptoethanol, 0.1 M MES (Crystals were soaked in mother liquor containing 1 M magnesium chloride for 1 hour), pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropsodium acetate0.1 (M)
21dropMES0.1 (M)
31dropbeta-mercaptoethanol5 (mM)
41dropPEG5000 MME30 (%(w/v))
51dropprotein0.56 (mM)
61reservoir1 (M)or 0.5M CaCl2

251801

PDB entries from 2026-04-08

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