1K5M
Crystal Structure of a Human Rhinovirus Type 14:Human Immunodeficiency Virus Type 1 V3 Loop Chimeric Virus MN-III-2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X25 |
Synchrotron site | NSLS |
Beamline | X25 |
Temperature [K] | 108 |
Detector technology | CCD |
Collection date | 1998-02-01 |
Detector | NONIUS CAD4 |
Wavelength(s) | 1.10 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 318.900, 349.300, 368.400 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 50.000 - 2.700 |
Rwork | 0.216 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | Wild-type HRV14 structure coordinates (PDB entry 4RHV) |
RMSD bond length | 0.010 |
RMSD bond angle | 26.700 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | X-PLOR |
Refinement software | X-PLOR (3.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.800 |
High resolution limit [Å] | 2.700 | 2.700 |
Rmerge | 0.114 | 0.212 |
Total number of observations | 7100958 * | |
Number of reflections | 513239 | |
<I/σ(I)> | 10 | 4 |
Completeness [%] | 92.4 * | 81.6 * |
Redundancy | 13.8 | 5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 298 | 1.5 M ammonium formate and 0.15 M sodium HEPES, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 298 | 1.5 M ammonium formate and 0.15 M sodium HEPES, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | reservoir | ammonium formate | 1.5 (M) | |
2 | 1 | reservoir | sodium HEPES | 0.15 (M) | pH7.5 |