Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1K4W

X-ray structure of the orphan nuclear receptor ROR beta ligand-binding domain in the active conformation

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID14-3
Synchrotron siteESRF
BeamlineID14-3
Temperature [K]130
Detector technologyCCD
Collection date2000-07-06
DetectorMAR CCD 165 mm
Wavelength(s)0.931
Spacegroup nameP 21 21 21
Unit cell lengths52.302, 58.489, 106.036
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution30.000 - 1.900
R-factor0.224

*

Rwork0.224
R-free0.24940
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2lbd
RMSD bond length0.008
RMSD bond angle1.282
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareCNS (1.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0001.920
High resolution limit [Å]1.8501.850
Rmerge0.0360.231
Number of reflections28901
<I/σ(I)>29.85.4
Completeness [%]99.999.8
Redundancy4.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP822

*

PEG 6000, NaCl, Tris.HCl, CHAPS, DTT, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 295K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11reservoirTris-HCl100 (mM)pH8.0
21reservoirPEG600015 (%)

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon