1K1X
Crystal structure of 4-alpha-glucanotransferase from thermococcus litoralis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL45PX |
Synchrotron site | SPring-8 |
Beamline | BL45PX |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2000-11-07 |
Detector | RIGAKU RAXIS |
Wavelength(s) | 1.0200 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 137.682, 161.494, 70.384 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 40.000 * - 2.400 |
R-factor | 0.197 |
Rwork | 0.195 |
R-free | 0.25600 * |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.006 |
RMSD bond angle | 1.270 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | CNS |
Refinement software | CNS |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.000 * | 2.490 |
High resolution limit [Å] | 2.400 | 2.400 |
Rmerge | 0.090 * | 0.321 * |
Total number of observations | 274277 * | |
Number of reflections | 61753 * | 8891 * |
Completeness [%] | 99.9 * | 99.9 * |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 * | 25 * | MPD, CALCIUM CHLORIDE, TRIS, pH 8.0, VAPOR DIFFUSION, SITTING DROP, temperature 298K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | reservoir | MPD | 35 (%(w/v)) | |
2 | 1 | reservoir | 20 (mM) | ||
3 | 1 | reservoir | Tris-HCl | 0.1 (M) | pH8.0 |
4 | 1 | drop | protein | 10-20 (mg/ml) | |
5 | 1 | drop | Tris-HCl | 5 (mM) | pH7.5 |
6 | 1 | drop | dithiothreitol | 10 (mM) |