1JYH
Crystal Structure of the Escherichia coli SbmC protein (AKA Gyrase Inhibitory Protein GyrI, AKA YeeB)
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X9A |
Synchrotron site | NSLS |
Beamline | X9A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2001-08-08 |
Detector | MARRESEARCH |
Wavelength(s) | 0.97935, 0.97954 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 72.440, 72.440, 80.891 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 18.000 * - 1.800 |
R-factor | 0.196 |
Rwork | 0.196 |
R-free | 0.22200 |
Structure solution method | MAD |
RMSD bond length | 0.005 |
RMSD bond angle | 1.300 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | MLPHARE |
Refinement software | CNS (1.0) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 | 1.900 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.057 | 0.090 |
Number of reflections | 19658 | |
Completeness [%] | 95.7 | 99.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 * | 295 | PEG2000 monomethyl ether, ammonium sulfate, sodium acetate, pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 295K |
1 | VAPOR DIFFUSION, HANGING DROP | 7 * | 295 | PEG2000 monomethyl ether, ammonium sulfate, sodium acetate, pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 295K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | reservoir | sodium acetate | 0.1 (M) | pH4.6 |
2 | 1 | reservoir | ammonium sulfate | 40 (mM) | |
3 | 1 | reservoir | PEG2000MME | 26 (%(w/v)) | |
4 | 1 | drop | HEPES | 20 (mM) | pH7.0 |
5 | 1 | drop | 100 (mM) | ||
6 | 1 | drop | dithiothreitol | 3 (mM) |