Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1JXH

4-Amino-5-hydroxymethyl-2-methylpyrimidine Phosphate Kinase from Salmonella typhimurium

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsCHESS BEAMLINE A1
Synchrotron siteCHESS
BeamlineA1
Temperature [K]100
Detector technologyCCD
Collection date2000-06-22
DetectorADSC QUANTUM 4
Wavelength(s)0.909
Spacegroup nameP 41 21 2
Unit cell lengths77.724, 77.724, 183.419
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution25.000 - 2.300
R-factor0.235

*

Rwork0.235
R-free0.27500

*

Structure solution methodMAD
RMSD bond length0.006
RMSD bond angle22.950

*

Data reduction softwareMOSFLM
Data scaling softwareSCALEPACK
Phasing softwareMLPHARE
Refinement softwareCNS
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]25.000
High resolution limit [Å]2.300
Rmerge0.063

*

0.217

*

Total number of observations177754

*

Number of reflections25741

*

<I/σ(I)>8.3
Completeness [%]99.9

*

99.9

*

Redundancy77.3

*

Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP718

*

magnesium sulfate, MES, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 291K
1VAPOR DIFFUSION, HANGING DROP718

*

magnesium sulfate, MES, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 291K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein6 (mg/ml)
21reservoir1.35 (M)
31reservoirMES0.15 (M)pH7.0

227111

PDB entries from 2024-11-06

PDB statisticsPDBj update infoContact PDBjnumon