1JTD
Crystal structure of beta-lactamase inhibitor protein-II in complex with TEM-1 beta-lactamase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU RU200 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 1999-12-14 |
Detector | RIGAKU RAXIS IIC |
Wavelength(s) | 1.5418 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 47.525, 84.918, 147.694 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 24.540 - 2.300 |
R-factor | 0.178 * |
Rwork | 0.178 |
R-free | 0.23000 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | TEM-1 beta-lactamase |
RMSD bond length | 0.008 |
RMSD bond angle | 1.400 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | AMoRE |
Refinement software | CNS (1.0) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 25.000 | 2.380 |
High resolution limit [Å] | 2.300 | 2.300 |
Rmerge | 0.053 * | 0.132 * |
Total number of observations | 92242 * | |
Number of reflections | 27197 | |
<I/σ(I)> | 20 | 7.6 |
Completeness [%] | 98.3 | 89.5 |
Redundancy | 3.39 | 3.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 * | 20 * | PEG8000, calcium acetate, sodium cacodylate, pH 6.4, VAPOR DIFFUSION, HANGING DROP, temperature 293K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | Tris | 50 (mM) | |
2 | 1 | drop | 150 (mM) | ||
3 | 1 | drop | protein | 10 (mg/ml) | |
4 | 1 | reservoir | PEG8000 | 24 (%(w/v)) | |
5 | 1 | reservoir | calcium acetate | 20 (mM) | |
6 | 1 | reservoir | sodium cacodylate | 67 (mM) |