Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1JQ0

Mutation that destabilize the gp41 core: determinants for stabilizing the SIV/CPmac envelope glycoprotein complex. Mutant structure.

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X25
Synchrotron siteNSLS
BeamlineX25
Temperature [K]95
Detector technologyCCD
Collection date2001-05-30
DetectorBRANDEIS - B4
Wavelength(s)1.1000
Spacegroup nameH 3 2
Unit cell lengths48.877, 48.877, 150.987
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution50.000

*

- 1.700
R-factor0.209

*

Rwork0.209
R-free0.25200
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1qbz
RMSD bond length0.006
RMSD bond angle13.600

*

Data reduction softwareMADNESS
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareCNS (1.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.760
High resolution limit [Å]1.7001.700
Rmerge0.0400.249
Total number of observations137718

*

Number of reflections7973
<I/σ(I)>16.69
Completeness [%]99.999.5
Redundancy9.69.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP298Sodium formate, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein15 (mg/ml)
21reservoirsodium formate3.8 (M)

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon