1JMM
Crystal structure of the V-region of Streptococcus mutans antigen I/II
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE BM14 |
Synchrotron site | ESRF |
Beamline | BM14 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2000-07-14 |
Detector | MARRESEARCH |
Wavelength(s) | 0.97881,0.97903,0.93928 |
Spacegroup name | P 63 2 2 |
Unit cell lengths | 124.570, 124.570, 147.692 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 20.000 * - 2.400 |
R-factor | 0.207 |
Rwork | 0.207 |
R-free | 0.23500 * |
Structure solution method | MAD |
RMSD bond length | 0.005 * |
RMSD bond angle | 1.320 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | SOLVE |
Refinement software | CNS (1.0) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 | 2.490 |
High resolution limit [Å] | 2.400 | 2.400 |
Rmerge | 0.066 | 0.159 |
Number of reflections | 49439 | |
<I/σ(I)> | 34.5 | 15.7 |
Completeness [%] | 99.3 | 99.3 |
Redundancy | 6 | 6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.6 | 4 or 10 * | 15% PEG 4000, sodium acetate, 0.1M ammonium sulfate, pH 4.6, VAPOR DIFFUSION, HANGING DROP at 277K |
1 | VAPOR DIFFUSION, HANGING DROP | 4.6 | 4 or 10 * | 15% PEG 4000, sodium acetate, 0.1M ammonium sulfate, pH 4.6, VAPOR DIFFUSION, HANGING DROP at 277K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 25 (mg/ml) | |
2 | 1 | drop | TCEP | 1 (mM) | |
3 | 1 | reservoir | PEG4000 | 15 (%(w/v)) | |
4 | 1 | reservoir | sodium acetate | 0.1 (M) | pH4.6 |
5 | 1 | reservoir | ammonium sulfate | 0.1 (M) | |
6 | 1 | reservoir | glycerol | 20 (%(v/v)) | |
7 | 1 | reservoir | TCEP | 1 (mM) |