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1JMM

Crystal structure of the V-region of Streptococcus mutans antigen I/II

Experimental procedure
Experimental methodMAD
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE BM14
Synchrotron siteESRF
BeamlineBM14
Temperature [K]100
Detector technologyCCD
Collection date2000-07-14
DetectorMARRESEARCH
Wavelength(s)0.97881,0.97903,0.93928
Spacegroup nameP 63 2 2
Unit cell lengths124.570, 124.570, 147.692
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution20.000

*

- 2.400
R-factor0.207
Rwork0.207
R-free0.23500

*

Structure solution methodMAD
RMSD bond length0.005

*

RMSD bond angle1.320

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareSOLVE
Refinement softwareCNS (1.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0002.490
High resolution limit [Å]2.4002.400
Rmerge0.0660.159
Number of reflections49439
<I/σ(I)>34.515.7
Completeness [%]99.399.3
Redundancy66
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP4.64 or 10

*

15% PEG 4000, sodium acetate, 0.1M ammonium sulfate, pH 4.6, VAPOR DIFFUSION, HANGING DROP at 277K
1VAPOR DIFFUSION, HANGING DROP4.64 or 10

*

15% PEG 4000, sodium acetate, 0.1M ammonium sulfate, pH 4.6, VAPOR DIFFUSION, HANGING DROP at 277K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein25 (mg/ml)
21dropTCEP1 (mM)
31reservoirPEG400015 (%(w/v))
41reservoirsodium acetate0.1 (M)pH4.6
51reservoirammonium sulfate0.1 (M)
61reservoirglycerol20 (%(v/v))
71reservoirTCEP1 (mM)

226707

PDB entries from 2024-10-30

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