Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1JL1

D10A E. coli ribonuclease HI

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL9-2
Synchrotron siteSSRL
BeamlineBL9-2
Temperature [K]100
Detector technologyCCD
Collection date2000-02-28
DetectorMARRESEARCH
Wavelength(s)1.000
Spacegroup nameP 21 21 21
Unit cell lengths37.016, 40.874, 85.305
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution20.000 - 1.300
R-factor0.223

*

Rwork0.223
R-free0.26300
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1f21
RMSD bond length0.008

*

RMSD bond angle2.000

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareREFMAC
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0001.360
High resolution limit [Å]1.3001.300
Rmerge0.0880.188

*

Number of reflections28054
Completeness [%]99.497.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8295used microseeding

*

Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11reservoirHEPES20 (mM)pH8.0
21reservoirPEG335010 (%(w/v))
31dropprotein6 (mg/ml)

227111

PDB entries from 2024-11-06

PDB statisticsPDBj update infoContact PDBjnumon