1JB6
Crystal Structure of Dimerization Domain (1-33) of HNF-1alpha
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2000-03-24 |
Detector | SBC-2 |
Wavelength(s) | 0.9794, 0.9800, 1.0030 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 28.420, 42.190, 42.430 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 40.000 - 1.700 |
R-factor | 0.231 * |
Rwork | 0.231 |
R-free | 0.24500 |
Structure solution method | MAD |
RMSD bond length | 0.004 |
RMSD bond angle | 0.800 |
Data reduction software | d*TREK ((D*TREK)) |
Data scaling software | HKL-2000 |
Phasing software | CNS |
Refinement software | CNS |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.000 | 1.760 |
High resolution limit [Å] | 1.700 | 1.700 |
Number of reflections | 5245 | |
Completeness [%] | 88.0 | |
Redundancy | 6 | 5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 * | 4 * | MPD, Tris-HCl, DTT, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | peptide | 3 (mM) | |
2 | 1 | drop | Tris-HCl | 50 (mM) | |
3 | 1 | drop | dithiothreitol | 2 (mM) | |
4 | 1 | reservoir | MPD | 20 (%(v/v)) | |
5 | 1 | reservoir | Tris-HCl | 50 (mM) | |
6 | 1 | reservoir | dithiothreitol | 1 (mM) |