1J58
Crystal Structure of Oxalate Decarboxylase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CHESS BEAMLINE F2 |
Synchrotron site | CHESS |
Beamline | F2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2001-05-15 |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | .9791, 0.9794, 0.9641, 0.9807 |
Spacegroup name | H 3 2 |
Unit cell lengths | 154.700, 154.700, 123.700 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 25.000 * - 1.750 |
R-factor | 0.181 |
Rwork | 0.176 |
R-free | 0.17840 * |
RMSD bond length | 0.005 |
RMSD bond angle | 25.000 * |
Data reduction software | MOSFLM |
Data scaling software | CCP4 ((TRUNCATE)) |
Phasing software | MLPHARE |
Refinement software | CNS (1.0) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 29.830 | 1.850 |
High resolution limit [Å] | 1.750 | 1.750 |
Rmerge | 0.083 | 0.325 * |
Total number of observations | 406760 * | |
Number of reflections | 57307 * | |
<I/σ(I)> | 7.1 | |
Completeness [%] | 99.9 * | 99.7 |
Redundancy | 7.1 * | 3.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion, hanging drop * | 8 | 298 | PEG 4000, Tris-Hcl, sodium chloride, pH 8.0, VAPOR DIFFUSION, temperature 298K |
1 | Vapor diffusion, hanging drop * | 8 | 298 | PEG 4000, Tris-Hcl, sodium chloride, pH 8.0, VAPOR DIFFUSION, temperature 298K |
1 | Vapor diffusion, hanging drop * | 8 | 298 | PEG 4000, Tris-Hcl, sodium chloride, pH 8.0, VAPOR DIFFUSION, temperature 298K |
1 | Vapor diffusion, hanging drop * | 8 | 298 | PEG 4000, Tris-Hcl, sodium chloride, pH 8.0, VAPOR DIFFUSION, temperature 298K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 3 (mg/ml) | |
2 | 1 | reservoir | PEG4000 | 6 (%(w/w)) | |
3 | 1 | reservoir | Tris | 200 (mM) | pH8.0 |