1J3U
Crystal structure of aspartase from Bacillus sp. YM55-1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-18B |
Synchrotron site | Photon Factory |
Beamline | BL-18B |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2000-02-01 |
Detector | FUJI |
Wavelength(s) | 1.0 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 74.900, 139.400, 100.200 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 55.100 * - 2.500 |
R-factor | 0.221 |
Rwork | 0.221 |
R-free | 0.26600 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 21.200 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | X-PLOR |
Refinement software | CNS (1.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 55.100 | 2.590 |
High resolution limit [Å] | 2.500 | 2.500 |
Rmerge | 0.102 | 0.333 * |
Total number of observations | 67393 * | |
Number of reflections | 33398 | |
Completeness [%] | 90.1 | 71.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 30 * | PEG4000, 2-propanol, HEPES-Na, magnesium chloride, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 303K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | potassium phosphate | 50 (mM) | pH7.5 |
2 | 1 | drop | enzyme | 10 (mg/ml) | |
3 | 1 | reservoir | PEG4000 | 25 (%(w/v)) | |
4 | 1 | reservoir | 2-propanol | 10 (%(v/v)) | |
5 | 1 | reservoir | sodium HEPES | 0.1 (M) | pH7.5 |