1IKG
MICHAELIS COMPLEX OF STREPTOMYCES R61 DD-PEPTIDASE WITH A SPECIFIC PEPTIDOGLYCAN SUBSTRATE FRAGMENT
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU RU200 |
Temperature [K] | 100 |
Detector technology | AREA DETECTOR |
Collection date | 1999-11-13 |
Detector | SIEMENS HI-STAR |
Wavelength(s) | 1.542 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 50.873, 66.828, 100.129 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 28.000 * - 1.900 |
R-factor | 0.15 |
Rwork | 0.150 |
R-free | 0.18400 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 3pte |
RMSD bond length | 0.012 |
RMSD bond angle | 23.700 * |
Data reduction software | X-GEN |
Data scaling software | X-GEN |
Phasing software | CNS |
Refinement software | CNS |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 28.000 | 2.020 |
High resolution limit [Å] | 1.900 | 1.900 |
Rmerge | 0.044 * | 0.086 * |
Total number of observations | 130497 * | |
Number of reflections | 26003 | |
<I/σ(I)> | 22.5 | |
Completeness [%] | 93.0 * | 70 |
Redundancy | 3.4 | 2.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.8 | PEG 8000, SODIUM PHOSPHATE, pH 6.8, VAPOR DIFFUSION, HANGING DROP, temperature 100K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | reservoir | sodium phosphate | 50 (mM) | pH6.8 |
2 | 1 | reservoir | PEG8000 | 30 (%(w/v)) | |
3 | 1 | reservoir | glycerol | 5 (%(v/v)) |