Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1IK9

CRYSTAL STRUCTURE OF A XRCC4-DNA LIGASE IV COMPLEX

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID14-4
Synchrotron siteESRF
BeamlineID14-4
Temperature [K]100
Detector technologyCCD
Collection date2001-02-08
DetectorADSC QUANTUM 4
Wavelength(s)0.97950
Spacegroup nameP 21 21 21
Unit cell lengths45.062, 79.628, 242.142
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution33.260 - 2.300
R-factor0.228

*

Rwork0.228
R-free0.26600
Structure solution methodSAS
RMSD bond length0.007
RMSD bond angle1.100
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareSHARP
Refinement softwareCNS (1.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]33.2602.350
High resolution limit [Å]2.3002.300
Rmerge0.0510.229
Total number of observations72477

*

Number of reflections34224
<I/σ(I)>17.92.3
Completeness [%]85.544.4
Redundancy2.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6291used seeding

*

Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein0.050 (mM)
21dropTris-HCl10 (mM)pH8.0
31drop150 (mM)
41dropPEG60001.5 (%(w/v))
51dropMES0.05 (M)pH6.0
71dropxylitol precipitant solution1.5 (%(w/v))
81reservoirPEG60006 (%(w/v))
91reservoirMES0.1 (M)pH6.0

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon