1IDU
CRYSTAL STRUCTURE OF THE PEROXIDE FORM OF THE VANADIUM-CONTAINING CHLOROPEROXIDASE FROM CURVULARIA INAEQUALIS
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU RU200 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 1996-06-23 |
Detector | MARRESEARCH |
Wavelength(s) | 1.5418 |
Spacegroup name | H 3 |
Unit cell lengths | 129.950, 129.950, 111.710 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 8.000 - 2.240 |
Rwork | 0.177 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 1vnc |
RMSD bond length | 0.011 |
RMSD bond angle | 23.170 * |
Data reduction software | MOSFLM |
Data scaling software | CCP4 ((AGROVATA) |
Phasing software | CCP4 |
Refinement software | X-PLOR (3.843) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 33.840 | 2.340 |
High resolution limit [Å] | 2.240 | 2.240 |
Rmerge | 0.118 | 0.297 |
Total number of observations | 102166 * | |
Number of reflections | 29878 | |
<I/σ(I)> | 7.5 | 1.2 |
Completeness [%] | 88.3 | 40.2 |
Redundancy | 2.1 | 2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 21 * | Reservoir: 1.5 M ammonium sulfate, 0.1 M Tris-HCl; protein drop: 7.5 microliter protein solution (8.7 mg/ml), 1 mM Na3VO4 plus 2.5 microliter reservoir solution. The peroxide complex was produced by soaking the crystals in mother liquor (2M ammonium sulfate, 0.1 M Tris-H2SO4, pH 8.0), containing 20 mM peroxide, for two hours and then flash cooled., VAPOR DIFFUSION, HANGING DROP, temperature 294K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 6.5 (mg/ml) | |
2 | 1 | drop | Mops | 3.75 (mM) | |
3 | 1 | drop | 0.75 (M) | ||
4 | 1 | drop | ammonium sulfate | 0.375 (M) | |
5 | 1 | drop | Tris-HCl | 0.025 (M) | |
6 | 1 | drop | 0.005 (%) | ||
7 | 1 | reservoir | ammonium sulfate | 1.6 (M) | |
8 | 1 | reservoir | Tris-HCl | 0.1 (M) | |
9 | 1 | reservoir | 0.02 (%) |