Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1I4Z

THE CRYSTAL STRUCTURE OF PHASCOLOPSIS GOULDII L98Y METHEMERYTHRIN

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU RU200
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date1998-08-08
DetectorRIGAKU RAXIS IV
Wavelength(s)1.5418
Spacegroup nameP 1 21 1
Unit cell lengths54.083, 129.991, 71.413
Unit cell angles90.00, 111.22, 90.00
Refinement procedure
Resolution66.570 - 2.100
R-factor0.23

*

Rwork0.248
R-free0.31100
Structure solution methodDifference Fourier Analysis
Starting model (for MR)Phascolopsis gouldii wild type methemerythrin
RMSD bond length0.015
RMSD bond angle1.400
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareX-PLOR
Refinement softwareX-PLOR (3.843)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]66.5702.230
High resolution limit [Å]2.1002.100
Rmerge0.0790.280
Number of reflections45724
<I/σ(I)>4.18
Completeness [%]85.367.2
Redundancy1.431.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.5281PEG 4000, glycerol, HEPES, sodium sulfate, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 281K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein15 (mgHr/mL)
21reservoirPEG400020 (%(w/v))
31reservoirglycerol25 (%(w/v))

223166

PDB entries from 2024-07-31

PDB statisticsPDBj update infoContact PDBjnumon