1I3H
CONCANAVALIN A-DIMANNOSE STRUCTURE
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | ENRAF-NONIUS |
Temperature [K] | 298 |
Detector technology | IMAGE PLATE |
Collection date | 2000-01-01 |
Detector | MAC Science DIP-2000 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 90.900, 86.410, 65.420 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 40.000 - 1.200 |
R-factor | 0.1697 |
Rwork | 0.167 |
R-free | 0.19000 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.020 |
RMSD bond angle | 1.820 * |
Data reduction software | DENZO |
Data scaling software | CCP4 ((SCALA)) |
Phasing software | AMoRE |
Refinement software | REFMAC |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.000 | 1.300 |
High resolution limit [Å] | 1.200 | 1.200 |
Rmerge | 0.112 | 0.453 |
Number of reflections | 76521 | |
Completeness [%] | 87.2 | 89 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 * | 298 | PEG 6000, citirc acid, manganese chloride, calcium chloride, pH 5.0, VAPOR DIFFUSION, SITTING DROP, temperature 298K |
1 | VAPOR DIFFUSION, SITTING DROP | 7 * | 298 | PEG 6000, citirc acid, manganese chloride, calcium chloride, pH 5.0, VAPOR DIFFUSION, SITTING DROP, temperature 298K |
1 | VAPOR DIFFUSION, SITTING DROP | 7 * | 298 | PEG 6000, citirc acid, manganese chloride, calcium chloride, pH 5.0, VAPOR DIFFUSION, SITTING DROP, temperature 298K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | mannobiose | 18 (mM) | |
2 | 1 | drop | jack bean concanavalin A | 0.6 (mM) | |
3 | 1 | drop | 1 (mM) | ||
4 | 1 | drop | Tris | 20 (mM) | |
5 | 1 | drop | 0.1 (M) | ||
6 | 1 | reservoir | PEG6000 | 10 (%(w/v)) | |
7 | 1 | reservoir | citric acid | 0.1 (M) | |
8 | 1 | drop | 1 (mM) |