1I2Y
1.66 A STRUCTURE OF A-DUPLEX WITH BULGED ADENOSINE, SPERMINE FORM
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 5ID-B |
| Synchrotron site | APS |
| Beamline | 5ID-B |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 1998-01-11 |
| Detector | MARRESEARCH |
| Wavelength(s) | 1.0 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 30.530, 45.220, 162.020 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 10.000 - 1.660 |
| R-factor | 0.217 * |
| Rwork | 0.217 |
| R-free | 0.24500 * |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.011 * |
| RMSD bond angle | 1.540 * |
| Data reduction software | DENZO |
| Data scaling software | SCALEPACK |
| Phasing software | AMoRE |
| Refinement software | CNS (1.0) |
Data quality characteristics
| Overall | |
| Low resolution limit [Å] | 20.000 |
| High resolution limit [Å] | 1.650 * |
| Rmerge | 0.042 * |
| Number of reflections | 26875 * |
| Completeness [%] | 97.4 * |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | Vapor diffusion, hanging drop * | 6 | 298 | spermine, MPD. pH 6.0, VAPOR DIFFUSION, SITTING DROP at 298 |
Crystallization Reagents
| ID | crystal ID | solution ID | reagent name | concentration | details |
| 1 | 1 | 1 | spermine | ||
| 2 | 1 | 1 | MPD | ||
| 3 | 1 | 2 | MPD |
Crystallization Reagents in Literatures
| ID | crystal ID | solution | reagent name | concentration (unit) | details |
| 1 | 1 | drop | DNA | 0.72 (mM) | |
| 2 | 1 | reservoir | sodium cacodylate | 20 (mM) | |
| 3 | 1 | reservoir | spermine | 25 (mM) | |
| 4 | 1 | reservoir | MPD | 40 (%) |






