1HYR
CRYSTAL STRUCTURE OF HUMAN MICA IN COMPLEX WITH NATURAL KILLER CELL RECEPTOR NKG2D
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.2 |
Synchrotron site | ALS |
Beamline | 5.0.2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2000-10-10 |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 1.100 |
Spacegroup name | P 4 21 2 |
Unit cell lengths | 122.780, 122.780, 101.820 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.780 - 2.700 |
R-factor | 0.227 |
Rwork | 0.227 |
R-free | 0.28200 |
Structure solution method | MAD |
RMSD bond length | 0.007 |
RMSD bond angle | 1.400 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | CNS |
Refinement software | CNS |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 2.800 |
High resolution limit [Å] | 2.700 | 2.700 |
Rmerge | 0.076 | 0.425 |
Total number of observations | 256599 * | |
Number of reflections | 21938 | |
<I/σ(I)> | 34 | 4.1 |
Completeness [%] | 99.9 | 100 |
Redundancy | 11.7 | 9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 * | 22 * | (NH4)2SO4, pH 6.50, VAPOR DIFFUSION, SITTING DROP, temperature 295.0K |
1 | VAPOR DIFFUSION, SITTING DROP | 7 * | 22 * | (NH4)2SO4, pH 6.50, VAPOR DIFFUSION, SITTING DROP, temperature 295.0K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 7.5 (mg/ml) | |
2 | 1 | drop | PIPES | 25 (mM) | |
3 | 1 | drop | EDTA | 1 (mM) | |
4 | 1 | drop | 0.02 (%) | ||
5 | 1 | reservoir | ammonium sulfate | 0.4 (M) | |
6 | 1 | reservoir | MES | 50 (mM) |