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1HQ0

CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF E.COLI CYTOTOXIC NECROTIZING FACTOR TYPE 1

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2000-03-28
DetectorMAR scanner 345 mm plate
Wavelength(s)1.54180
Spacegroup nameP 65
Unit cell lengths55.000, 55.000, 176.200
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution20.000 - 1.830
R-factor0.191

*

Rwork0.191
R-free0.21400
Structure solution methodMAD
RMSD bond length0.005
RMSD bond angle1.200
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareSOLVE
Refinement softwareCNS (1.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0001.810
High resolution limit [Å]1.7601.760
Rmerge0.0560.757
Number of reflections26431
<I/σ(I)>36.72.6
Completeness [%]99.999.5
Redundancy8.76.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion

*

8

*

37

*

Sodium phosphate, potassium phosphate, 1,4-butanediol, HEPES, DTT, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 310K
1Vapor diffusion

*

8

*

37

*

Sodium phosphate, potassium phosphate, 1,4-butanediol, HEPES, DTT, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 310K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11reservoirsodium phosphate0.65 (M)
21reservoirpotassium phosphate0.65 (M)
31reservoirHEPES100 (mM)
41reservoir1,4-butanediol5 (%(v/v))
51reservoirdithiothreitol2 (mM)
61drop150 (mM)
71dropTris20 (mM)
81dropdithiothreitol2 (mM)
91dropprotein15 (mg/ml)

218500

PDB entries from 2024-04-17

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