1HN4
PROPHOSPHOLIPASE A2 DIMER COMPLEXED WITH MJ33, SULFATE, AND CALCIUM
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU RUH3R |
Temperature [K] | 93 |
Detector technology | IMAGE PLATE |
Collection date | 2000-05-10 |
Detector | RIGAKU RAXIS IV |
Wavelength(s) | 1.5418 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 37.488, 54.852, 56.896 |
Unit cell angles | 90.00, 104.06, 90.00 |
Refinement procedure
Resolution | 20.000 - 1.500 |
R-factor | 0.215 * |
Rwork | 0.215 |
R-free | 0.23950 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PDB Code 1P2P Phospholipase A2 |
RMSD bond length | 0.005 |
RMSD bond angle | 1.100 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | CNS |
Refinement software | CNS |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 | 1.560 |
High resolution limit [Å] | 1.500 | 1.500 |
Rmerge | 0.030 | 0.191 |
Number of reflections | 32685 | |
<I/σ(I)> | 40.6 | |
Completeness [%] | 91.0 | 86.3 |
Redundancy | 7.2 | 2.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.6 | 25 * | 25% PEG 3350, 0.2 M ammonium sulfate, 0.1 M sodium acetate trihydrate, pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 298K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 15 (mg/ml) | |
2 | 1 | drop | 10 (mM) | ||
3 | 1 | drop | MJ33 | 3 (mM) | |
4 | 1 | drop | ammonium sulfate | 0.2 (M) | |
5 | 1 | drop | sodium acetate | 0.1 (M) | pH4.6 |
6 | 1 | reservoir | xylitol | 35 (%sat) |