1HD8
Crystal structure of a deacylation-defective mutant of penicillin-binding protein 5 at 2.3 A resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | NONIUS FR391 |
Temperature [K] | 293 |
Detector technology | IMAGE PLATE |
Collection date | 1998-12-15 |
Detector | MACSCIENCE |
Spacegroup name | P 32 |
Unit cell lengths | 50.830, 50.830, 140.290 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 15.000 - 2.300 |
R-factor | 0.196 * |
Rwork | 0.199 |
R-free | 0.27000 * |
Structure solution method | MIR |
RMSD bond length | 0.011 * |
RMSD bond angle | 24.730 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | SHARP |
Refinement software | REFMAC |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 22.400 | 2.380 |
High resolution limit [Å] | 2.300 | 2.300 |
Rmerge | 0.069 * | |
Total number of observations | 43406 * | |
Number of reflections | 17239 | |
<I/σ(I)> | 13.2 | 3.3 |
Completeness [%] | 94.8 | 85.2 |
Redundancy | 2.52 | 1.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion * | 7 | 18 * | 20% POLYETHYLENE GLYCOL 4000, 50 MM TRIS PH 7.0, 0.2 % SODIUM AZIDE |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | reservoir | PEG4000 | 20 (%) | |
2 | 1 | reservoir | Tris-HCl | 50 (mM) | |
3 | 1 | reservoir | 0.2 (%) |