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1HCX

Choline binding domain of the major autolysin (C-LytA) from Streptococcus pneumoniae

Experimental procedure
Experimental methodMAD
Source typeSYNCHROTRON
Source detailsEMBL/DESY, HAMBURG BEAMLINE X31
Synchrotron siteEMBL/DESY, HAMBURG
BeamlineX31
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2000-10-30
DetectorMAR scanner 345 mm plate
Wavelength(s)0.9840,1.0695,1.0715
Spacegroup nameI 2 2 2
Unit cell lengths58.049, 118.177, 104.859
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution35.000

*

- 2.600
R-factor0.218

*

Rwork0.239
R-free0.28200

*

Structure solution methodMAD
RMSD bond length0.007

*

RMSD bond angle1.200

*

Data reduction softwareMOSFLM
Data scaling softwareSCALA
Phasing softwareSOLVE
Refinement softwareCNS (1.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]35.0002.740
High resolution limit [Å]2.6002.600
Rmerge0.049

*

0.266

*

Total number of observations105081

*

Number of reflections11378
<I/σ(I)>185.4
Completeness [%]99.7100
Redundancy4.54.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, sitting drop

*

6.4295

*

30% PEG 4000, 0.2 M NA-ACETATE, 0.1 M AMMONIUM-ACETATE, PH 6.4, 0.15 M CHOLINE-CL, 0.4 MM DDAO.
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11reservoirPEG400030 (%(w/v))
21reservoirammonium acetate0.2 (M)
31reservoirsodium citrate0.1 (M)pH6.4
41reservoirDDOA0.4 (mM)

237735

PDB entries from 2025-06-18

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