1H8H
Bovine mitochondrial F1-ATPase crystallised in the presence of 5mm AMPPNP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE BM14 |
Synchrotron site | ESRF |
Beamline | BM14 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 1997-09-18 |
Detector | MARRESEARCH |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 280.000, 107.000, 139.100 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 20.000 - 2.900 |
Rwork | 0.236 |
R-free | 0.29200 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PDB CODE 1E1Q BOVINE MITOCHONDRIAL F1-ATPASE AT 100K |
RMSD bond length | 0.010 |
RMSD bond angle | 0.026 |
Data reduction software | MOSFLM |
Data scaling software | CCP4 |
Phasing software | AMoRE |
Refinement software | REFMAC |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 37.270 | 3.070 |
High resolution limit [Å] | 2.880 | 2.870 |
Rmerge | 0.063 | 0.166 |
Total number of observations | 217558 * | |
Number of reflections | 79330 * | |
<I/σ(I)> | 13.5 | 7.3 |
Completeness [%] | 95.8 | 90.4 |
Redundancy | 2.5 | 2.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Microdialysis * | 8 | solution 2 also includes 0.02%(w/v) sodium azide, 0.001%(w/v) phenylmethylsulphonyl fluoride, 5 mM dithiothreitol, 5mM AMPPNP, 0.005mM ADP and 11-12%(w/v) PEG6000 * |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | 1 | protein | 11 (mg/ml) | |
10 | 1 | 1 | AMPPNP | 2 (mM) | |
11 | 1 | 1 | ADP | 0.04 (mM) | |
12 | 1 | 2 | Tri-sHCl | 50 (mM) | |
13 | 1 | 2 | sodium chloride | 200 (mM) | |
14 | 1 | 2 | EDTA | 1 (mM) | |
15 | 1 | 2 | magnesium sulphate | 20 (mM) | |
2 | 1 | 1 | Tris-HCl | 100 (mM) | |
3 | 1 | 1 | sodium chloride | 400 (mM) | |
4 | 1 | 1 | EDTA | 2 (mM) | |
5 | 1 | 1 | magnesium chloride | 4 (mM) | |
6 | 1 | 1 | sodium azide | 0.04 (%(w/v)) | |
7 | 1 | 1 | phenylmethylsulphonyl fluoride | 0.002 (%(w/v)) | |
8 | 1 | 1 | PEG6000 | 14 (%(w/v)) | |
9 | 1 | 1 | dithiothreitol | 10 (mM) |