1H6T
Internalin B: crystal structure of fused N-terminal domains.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU AFC-5 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2000-10-10 |
Detector | RAXIS IV++ |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 32.953, 72.818, 115.570 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 62.000 - 1.600 |
R-factor | 0.182 * |
Rwork | 0.165 |
R-free | 0.22900 * |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1d0b |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | AMoRE |
Refinement software | REFMAC |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.000 * | 1.660 |
High resolution limit [Å] | 1.600 | 1.600 |
Rmerge | 0.033 | 0.162 |
Number of reflections | 67222 * | |
<I/σ(I)> | 22 | 7.42 |
Completeness [%] | 93.2 * | 88.1 * |
Redundancy | 2 | 1.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | sparse matrix method * | 5 | 293 | 0.2M AMMONIUM SULFATE, 0.1 M SODIUM ACETATE, PH 5.0, 13% W/V PEG 4000, 6% V/V 2-METHYL-2,4-PENTANDIOL, T=20C, PROTEIN CONC.=10 MG/ML |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | 1 | PEG4000 | 14 (%(w/v)) | |
2 | 1 | 1 | MPD | 5 (%(v/v)) | |
3 | 1 | 1 | sodium acetate | 0.1 (M) | |
4 | 1 | 1 | ammonium acetate | 0.22 (M) |