Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1GV9

p58/ERGIC-53

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsMAX II BEAMLINE I711
Synchrotron siteMAX II
BeamlineI711
Temperature [K]110
DetectorMARRESEARCH
Spacegroup nameI 2 2 2
Unit cell lengths49.043, 85.407, 127.672
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution25.000

*

- 1.460
R-factor0.191

*

Rwork0.191
R-free0.21100

*

Structure solution methodMIR
RMSD bond length0.010
RMSD bond angle1.490

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Refinement softwareREFMAC (5.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]25.000
High resolution limit [Å]1.4601.460

*

Rmerge0.0410.119

*

Number of reflections44706
<I/σ(I)>22.2
Completeness [%]95.684.6

*

Redundancy4.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, hanging drop

*

7.25pH 7.25
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein10 (mg/ml)
21dropTris-HCl10 (mM)pH7.5
31drop1 (mM)
41reservoirsodium HEPES100 (mM)pH7.25
51reservoir1.6 (M)
61reservoirEDTA10 (mM)

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon