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1GPW

Structural evidence for ammonia tunneling across the (beta/alpha)8 barrel of the imidazole glycerol phosphate synthase bienzyme complex.

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsEMBL/DESY, HAMBURG BEAMLINE X11
Synchrotron siteEMBL/DESY, HAMBURG
BeamlineX11
Temperature [K]100
Detector technologyCCD
DetectorX-RAY RESEARCH
Spacegroup nameP 1 21 1
Unit cell lengths74.000, 91.900, 131.000
Unit cell angles90.00, 105.90, 90.00
Refinement procedure
Resolution30.000 - 2.400
R-factor0.226
Rwork0.226
R-free0.29000
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1thf
RMSD bond length0.008
RMSD bond angle1.500
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareCNS (1.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0002.450
High resolution limit [Å]2.3702.370
Rmerge0.0480.168
Number of reflections653565485

*

<I/σ(I)>284.5
Completeness [%]96.778.8
Redundancy2.92.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion

*

8PROTEIN SOLUTION: 10 MM TRIS (PH 8.0), 1 MM DTT, 1 MM EDTA, 28.8 MG/ML PROTEIN COMPLEX. PRECIPITATE SOLUTION: 15 %[W/V] PEG-8000, 0.9 M AMMONIUM NITRATE, 0.1 M HEPES/HCL (PH 8.5), 10 MM DTT, 5% [V/V] MPD
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropTris-NaOH10 (mM)pH8.0
21drop150 (mM)
31dropEDTA1 (mM)
41dropdithiothreitol5 (mM)
51dropprotein12.5 (mg/ml)
61reservoirsodium acetate0.1 (M)pH5.0
71reservoirdithiothreitol10 (mM)
81reservoir15 (mM)
91reservoirPEG20030 (%(v/v))

226707

PDB entries from 2024-10-30

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