Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1GKR

L-Hydantoinase (Dihydropyrimidinase) from Arthrobacter aurescens

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU
Temperature [K]283
Detector technologyAREA DETECTOR
Collection date1996-03-20
DetectorSIEMENS
Spacegroup nameP 1 21 1
Unit cell lengths111.500, 74.300, 146.900
Unit cell angles90.00, 106.57, 90.00
Refinement procedure
Resolution30.000 - 2.600
R-factor0.224
Rwork0.224
R-free0.24300

*

Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)HOMOLOGY MODEL FROM PDB ENTRY 1GKP
RMSD bond length0.009
RMSD bond angle24.800

*

Data reduction softwareXENGEN
Phasing softwareCNS
Refinement softwareCNS (1.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0002.740
High resolution limit [Å]2.6002.600
Rmerge0.0910.148
Total number of observations124261

*

Number of reflections61763
<I/σ(I)>8.52.5
Completeness [%]86.641.2
Redundancy21.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, sitting drop

*

8

*

292

*

May, O., (1996) Acta Crystallogr.,Sect.D, D52, 1209.

*

Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11reservoirPEG800016-18 (%(w/v))
21reservoir0.25 (M)
31reservoir0.5 (mM)
41reservoirMES0.1 (M)pH8.5
51dropL-hydantoinase10 (mg/ml)
61dropTris0.1 (M)pH8.0

227111

PDB entries from 2024-11-06

PDB statisticsPDBj update infoContact PDBjnumon