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1GKE

RAT TRANSTHYRETIN

Experimental procedure
Source typeROTATING ANODE
Source detailsRIGAKU FR-D
Temperature [K]293
Detector technologyIMAGE PLATE
DetectorRIGAKU
Spacegroup nameP 43 21 2
Unit cell lengths82.729, 82.729, 161.804
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution8.000 - 2.500
R-factor0.189
Rwork0.189
R-free0.30300
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)TETRAMER OF HUMAN TRANSTHYRETIN
RMSD bond length0.010
RMSD bond angle25.720

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Data reduction softwareR-AXIS (II)
Data scaling softwareR-AXIS (II)
Phasing softwareX-PLOR
Refinement softwareX-PLOR
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]73.5002.600
High resolution limit [Å]2.5002.500
Rmerge0.1040.101
Number of reflections16584
<I/σ(I)>62.1
Completeness [%]82.069.2
Redundancy2.951.95
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, hanging drop

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5PH 5.0, 55-65% AMMONIUM SULFATE 0.1M ACETATE BUFFER
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11reservoirammonium sulfate55-65 (%)
21reservoiracetate0.1 (M)

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PDB entries from 2024-11-06

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