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1GJV

Branched-chain alpha-ketoacid dehydrogenase kinase (BCK) complxed with ATP-gamma-S

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU RU200
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2001-04-15
DetectorMSC
Spacegroup nameP 42 21 2
Unit cell lengths127.722, 127.722, 74.314
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution36.940 - 2.700
R-factor0.231

*

Rwork0.218
R-free0.26900
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)BRANCHED-CHAIN ALPHA-KETOACID DEHYDROGENASE KINASE (BCK) SELENOMETHIONINE VARIANT
RMSD bond length0.011
RMSD bond angle22.100

*

Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareCNS (1.0)
Refinement softwareCNS (1.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]36.9002.800
High resolution limit [Å]2.7002.700
Rmerge0.061

*

0.582

*

Number of reflections17401
<I/σ(I)>24.42
Completeness [%]99.696.8
Redundancy4.63.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION7.520

*

VAPOR DIFFUSION 20C EQUAL AMOUNTS OF BCK (20 MG/ML IN 50 MM HEPES PH 7.5, 1 M SODIUM CHLORIDE,250 MM POTASSIUM CHLORIDE, 300 MM ARGININE, 20 MM BETA-MERCAPTOETHANOL 2 MM BENZAMIDINE, 2 MM MG-ATPGAMMAS, 2 MM MAGNESIUM CHLORIDE, 0.5 MM PMSF, 10% (W/V) GLYCEROL) AND RESERVOIR (8%(W/V) PEG-6000, 5% (V/V) ETHYLENE GLYCOL, 1 M NACL, 20 MM BETA-MERCAPTOETHANOL)
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein20 (mg/ml)
101dropglycerol10 (%(v/v))
111dropATP gammaS
121reservoirPEG60008 (%(w/v))
131reservoirethylene glycol5 (%(v/v))
141reservoir1 (M)
151reservoirbeta-mercaptoethanol20 (mM)
21dropHEPES50 (mM)
31drop1 (M)
41drop250 (mM)
51droparginine300 (mM)
61dropbeta-mercaptoethanol20 (mM)
71dropbenzamidine1 (mM)
81drop2 (mM)
91dropPMSF0.5 (mM)

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PDB entries from 2024-07-24

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