1FYM
SERENDIPITOUS CRYSTAL STRUCTURE CONTAINING THE HEAT SHOCK TRANSCRIPTION FACTOR'S DNA BINDING DOMAIN AND COGNATE DNA IN A TAIL-TO-TAIL ORIENTATION
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL7-1 |
Synchrotron site | SSRL |
Beamline | BL7-1 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 1995-01-01 |
Detector | MARRESEARCH |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 106.510, 34.020, 78.210 |
Unit cell angles | 90.00, 119.31, 90.00 |
Refinement procedure
Resolution | 20.000 - 2.200 |
R-factor | 0.211 * |
Rwork | 0.211 |
R-free | 0.29500 |
RMSD bond length | 0.007 |
RMSD bond angle | 1.388 |
Data reduction software | DENZO |
Data scaling software | CCP4 ((SCALA)) |
Phasing software | X-PLOR |
Refinement software | X-PLOR (3.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 | 2.250 |
High resolution limit [Å] | 2.200 | 2.200 |
Rmerge | 0.049 | 0.186 |
Number of reflections | 10644 | |
<I/σ(I)> | 12 | |
Completeness [%] | 84.5 | 72.7 |
Redundancy | 3.1 | 2.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion * | 7.5 * | 4 * | PEG 4000, Isopropanol, Cacodylate, Ammonium Acetate, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K |
Crystallization Reagents
ID | crystal ID | solution ID | reagent name | concentration | details |
1 | 1 | 1 | PEG 4000 | ||
2 | 1 | 1 | Isopropanol | ||
3 | 1 | 1 | Cacodylate | ||
4 | 1 | 1 | Ammonium Acetate |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | reservoir | PEG4000 | 20 (%) | |
2 | 1 | reservoir | isopropanol | 10 (%) | |
3 | 1 | reservoir | cacodylate | 50 (mM) | |
4 | 1 | reservoir | ammonium acetate | 200 (mM) | |
5 | 1 | drop | protein | 0.91 (mM) | |
6 | 1 | drop | DNA | 0.69 (mM) | |
7 | 1 | drop | Tris | 10 (mM) | |
8 | 1 | drop | 50 (mM) | ||
9 | 1 | drop | ammonium acetate | 400 (mM) |