1FLT
VEGF IN COMPLEX WITH DOMAIN 2 OF THE FLT-1 RECEPTOR
Experimental procedure
Source type | SYNCHROTRON |
Source details | CHESS BEAMLINE A1 |
Synchrotron site | CHESS |
Beamline | A1 |
Temperature [K] | 160 |
Detector technology | CCD |
Collection date | 1997-02 |
Detector | ADSC QUANTUM |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 81.440, 71.130, 77.860 |
Unit cell angles | 90.00, 105.28, 90.00 |
Refinement procedure
Resolution | 20.000 - 1.700 |
R-factor | 0.198 |
Rwork | 0.198 |
R-free | 0.26100 |
Structure solution method | MOLECULAR REPLACEMENT/NCS AVERAGING |
Starting model (for MR) | 1vpf |
RMSD bond length | 0.013 |
RMSD bond angle | 28.800 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | X-PLOR (3.851) |
Refinement software | X-PLOR (3.851) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 1.760 |
High resolution limit [Å] | 1.700 | 1.700 |
Rmerge | 0.052 * | 0.277 * |
Total number of observations | 332877 * | |
Number of reflections | 47047 | 4520 * |
<I/σ(I)> | 8.3 | 3.5 |
Completeness [%] | 99.0 | 95.8 |
Redundancy | 7 | 3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion, hanging drop * | 8.5 | drop solution was mixed with an equal volume of reservoir solution * |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 7 (mg/ml) | |
2 | 1 | drop | Tris-HCl | 20 (mM) | |
3 | 1 | reservoir | PEG4000 | 30 (%) | |
4 | 1 | reservoir | ammonium sulfate | 0.2 (M) | |
5 | 1 | reservoir | 0.02 (%) | ||
6 | 1 | reservoir | Tris-HCl | 0.15 (M) |