1FKM
CRYSTAL STRUCTURE OF THE YPT/RAB-GAP DOMAIN OF GYP1P
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | MPG/DESY, HAMBURG BEAMLINE BW6 |
Synchrotron site | MPG/DESY, HAMBURG |
Beamline | BW6 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 1999-12-13 |
Detector | MARRESEARCH |
Wavelength(s) | 0.9790, 0.9795, 0.9200 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 74.060, 74.060, 277.753 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 6.000 - 1.900 |
R-factor | 0.199 |
Rwork | 0.199 |
R-free | 0.22500 |
RMSD bond length | 0.005 |
RMSD bond angle | 1.100 |
Data scaling software | SCALEPACK |
Phasing software | CNS |
Refinement software | CNS |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.000 |
High resolution limit [Å] | 1.900 | 1.900 |
Rmerge | 0.094 | 0.242 |
Total number of observations | 237598 * | |
Number of reflections | 33503 | |
<I/σ(I)> | 14.4 | |
Completeness [%] | 91.2 | 97.1 |
Redundancy | 7 | 4.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 20 * | PEG MME 5000, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 18K |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 20 * | PEG MME 5000, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 18K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | reservoir | PEG5000 MME | 5 (%) | |
2 | 1 | reservoir | spermine-HCl | 5-10 (mM) | |
3 | 1 | reservoir | Tris | 20 (mM) | |
4 | 1 | drop | protein | 10 (mg/ml) |