1FBM
ASSEMBLY DOMAIN OF CARTILAGE OLIGOMERIC MATRIX PROTEIN IN COMPLEX WITH ALL-TRANS RETINOL
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | ELLIOTT GX-20 |
Temperature [K] | 298 |
Detector technology | IMAGE PLATE |
Collection date | 1997-12-01 |
Detector | MARRESEARCH |
Wavelength(s) | 1.5418 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 38.470, 49.470, 54.980 |
Unit cell angles | 90.00, 103.84, 90.00 |
Refinement procedure
Resolution | 3.000 - 2.700 |
Rwork | 0.195 |
RMSD bond length | 0.001 |
RMSD bond angle | 18.680 * |
Data reduction software | DENZO |
Data scaling software | CCP4 ((AGROVATA) |
Phasing software | AMoRE |
Refinement software | X-PLOR (3.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 3.000 | 3.000 |
High resolution limit [Å] | 2.700 | 2.700 |
Rmerge | 0.132 | |
Total number of observations | 20313 * | |
Number of reflections | 5464 | |
Completeness [%] | 86.0 | 87.6 |
Redundancy | 3.71 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 293 | COMPcc (16 mg/ml) in 20 mM sodium phosphate, 200 mM NaCl (pH 7.5) precipitant: 7-8% PEG 8000, 50 mM sodium cacodylate (pH 6.0), 50 mM sodium acetate, 50 mM calcium acetate , VAPOR DIFFUSION, HANGING DROP, temperature 20.0K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 16 (mg/ml) | |
2 | 1 | reservoir | PEG8000 | 7-8 (%) | |
3 | 1 | reservoir | sodium cacodylate | 50 (mM) | |
4 | 1 | reservoir | sodium acetate | 50 (mM) | |
5 | 1 | reservoir | calcium acetate | 50 (mM) |