1F88
CRYSTAL STRUCTURE OF BOVINE RHODOPSIN
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 1999-12-12 |
Detector | SBC-2 |
Spacegroup name | P 41 |
Unit cell lengths | 97.246, 97.246, 149.544 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 30.000 - 2.800 |
Rwork | 0.186 |
R-free | 0.23800 |
RMSD bond length | 0.011 |
RMSD bond angle | 1.490 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | SHARP |
Refinement software | CNS |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 2.900 |
High resolution limit [Å] | 2.800 | 2.800 |
Rmerge | 0.121 | 0.690 |
Total number of observations | 111245 * | |
Number of reflections | 33221 | |
<I/σ(I)> | 9.5 | |
Completeness [%] | 97.0 | 80.7 |
Redundancy | 3.35 | 2.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 277 | Okada, T., (2000) J. Struct. Biol., 130, 73. * |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | reservoir | MES | 30 (mM) | or sodium acetate |
2 | 1 | reservoir | beta-mercaptoehtanol | 5-7 (mM) | |
3 | 1 | reservoir | 65-90 (mM) | ||
4 | 1 | reservoir | HPTO | 0.55-0.75 (%) | |
5 | 1 | reservoir | NG | 0.45-0.55 (%) | |
6 | 1 | reservoir | ammonium sulfate | 0.84-0.86 (M) |