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1F7Y

THE CRYSTAL STRUCTURE OF TWO UUCG LOOPS HIGHLIGHTS THE ROLE PLAYED BY 2'-HYDROXYL GROUPS IN ITS UNUSUAL STABILITY

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsEMBL/DESY, HAMBURG BEAMLINE BW7A
Synchrotron siteEMBL/DESY, HAMBURG
BeamlineBW7A
Temperature [K]100
Detector technologyCCD
Collection date1999-10-18
DetectorMARRESEARCH
Spacegroup nameP 64 2 2
Unit cell lengths128.800, 128.800, 65.100
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution8.000 - 2.800
R-factor0.222
Rwork0.222
R-free0.28900
RMSD bond length0.006
RMSD bond angle1.300
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareSHARP
Refinement softwareCNS (0.4)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0002.900
High resolution limit [Å]2.8002.800
Rmerge0.0380.209
Number of reflections14823

*

Completeness [%]99.999.5
Redundancy8.16.3

*

Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.220

*

1 M (NH4)2SO4, 100 MM SODIUM CACODYLATE, 30 MM KCL, 1.5 MM MGCL2, pH 6.2, VAPOR DIFFUSION, HANGING DROP, temperature 295K
Crystallization Reagents
IDcrystal IDsolution IDreagent nameconcentrationdetails
111SODIUM CACODYLATE
211KCL
311MGCL2
411(NH4)2SO4
512KCL
612MGCL2
712(NH4)2SO4
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropRNA6 (mg/ml)
21dropS153 (mg/ml)
31reservoirammonium sulfate1.0 (M)
41reservoir1.5 (mM)
51reservoir50 (mM)
61reservoirsodium cacodylate50 (mM)pH6.2

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PDB entries from 2024-07-17

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