Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1ECB

ESCHERICHIA COLI GLUTAMINE PHOSPHORIBOSYLPYROPHOSPHATE (PRPP) AMIDOTRANSFERASE COMPLEXED WITH 2 GMP, 1 MG PER SUBUNIT

Experimental procedure
Source typeROTATING ANODE
Source detailsRIGAKU RUH2R
Temperature [K]110
Detector technologyIMAGE PLATE
Collection date1996-03
DetectorRIGAKU
Spacegroup nameP 21 21 21
Unit cell lengths95.800, 113.200, 199.600
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution15.000 - 2.700
R-factor0.208
Rwork0.208
R-free0.29100
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1ecf
RMSD bond length0.012
RMSD bond angle22.400

*

Data reduction softwareHKL ((DENZO))
Data scaling softwareHKL
Phasing softwareX-PLOR (3.8)
Refinement softwareX-PLOR (3.8)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0002.800
High resolution limit [Å]2.7002.700
Rmerge0.092

*

0.330

*

Total number of observations354923

*

Number of reflections58955
<I/σ(I)>12.73.5
Completeness [%]97.778.9
Redundancy6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion

*

65 MM GMP, 20 MM MGCL2, 100 MM BIS-TRIS PH 6.0, 10% PEG-3350, 10% 2-PROPANOL
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein5 (mg/ml)
101reservoir20 (mM)
111reservoirD,L-meso-2,3-butanediol18 (%)
121reservoirGMP1 (mM)
21dropGMP2.5 (mM)
31drop10 (mM)
41dropBis-Tris50 (mM)
51dropPEG33505 (%)
61drop2-propanol5 (%)
71reservoirbis-Tris100 (mM)
81reservoirPEG335010 (%)
91reservoir2-propanol10 (%)

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon