1E8C
Structure of MurE the UDP-N-acetylmuramyl tripeptide synthetase from E. coli
Experimental procedure
| Experimental method | MAD |
| Source type | SYNCHROTRON |
| Source details | ESRF BEAMLINE BM14 |
| Synchrotron site | ESRF |
| Beamline | BM14 |
| Temperature [K] | 110 |
| Detector technology | CCD |
| Collection date | 1999-11-15 |
| Detector | MARRESEARCH |
| Wavelength(s) | 0.9791,0.9790,0.8550,0.93 |
| Spacegroup name | C 2 2 21 |
| Unit cell lengths | 93.465, 99.690, 236.146 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 46.730 - 2.000 |
| R-factor | 0.202 |
| Rwork | 0.202 |
| R-free | 0.23000 |
| Structure solution method | MAD |
| RMSD bond length | 0.006 |
| RMSD bond angle | 23.500 * |
| Data reduction software | DENZO |
| Data scaling software | SCALEPACK |
| Phasing software | SOLVE |
| Refinement software | CNS (1.0) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 46.700 | 2.130 |
| High resolution limit [Å] | 2.000 | 2.000 |
| Rmerge | 0.066 * | 0.220 * |
| Total number of observations | 323548 * | |
| Number of reflections | 72674 * | |
| Completeness [%] | 98.3 | 91.2 |
| Redundancy | 4.5 | 3.9 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | Vapor diffusion * | 7.5 | HANGING DROP EXPERIMENT RESERVOIR: 13% PEG MME 5K, 0.5M LICL, 10% ISOPROPANOL, 0.1M HEPES PH 7.5, 5MM DTT, 1MM UDP-TRIPEPTIDE DROP: 2UL PROTEIN SOLUTION (MURE @ 10MGML-1 IN 20MM HEPES PH 7.5, 200MM NACL, 5MM DTT) WITH 2UL RESERVOIR SOLUTION. |
Crystallization Reagents in Literatures
| ID | crystal ID | solution | reagent name | concentration (unit) | details |
| 1 | 1 | drop | protein | 10 (mg/ml) | |
| 10 | 1 | reservoir | dithiothreitol | 5 (mM) | |
| 2 | 1 | drop | HEPES | 20 (mM) | |
| 3 | 1 | drop | 200 (mM) | ||
| 4 | 1 | drop | dithiothreitol | 5 (mM) | |
| 5 | 1 | drop | UMT | 1 (mM) | |
| 6 | 1 | reservoir | HEPES | 0.1 (M) | |
| 7 | 1 | reservoir | PEG MME5000 | 13 (%) | |
| 8 | 1 | reservoir | 0.5 (M) | ||
| 9 | 1 | reservoir | iso-propanol | 10 (%) |






