1E8A
The three-dimensional structure of human S100A12
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID14-4 |
Synchrotron site | ESRF |
Beamline | ID14-4 |
Temperature [K] | 120 |
Spacegroup name | H 3 |
Unit cell lengths | 99.600, 99.600, 64.200 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 25.000 - 1.950 |
R-factor | 0.178 * |
Rwork | 0.180 |
R-free | 0.22000 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1mho |
RMSD bond length | 0.018 |
RMSD bond angle | 1.740 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | MOLREP |
Refinement software | REFMAC |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 25.000 | 2.020 |
High resolution limit [Å] | 1.950 | 1.950 |
Rmerge | 0.086 | 0.258 * |
Number of reflections | 17174 | 1721 * |
<I/σ(I)> | 10.6 | 2.68 |
Completeness [%] | 99.3 | 99.1 |
Redundancy | 2.8 | 1.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 20-25% PEG 5K MONOMETHYL ETHER, 0.2M CALCIUM CHLORIDE, 0.1M SODIUM CACODILATE, HANGING DROPS, pH 6.50 |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 5.0-8.0 (mg/ml) | |
2 | 1 | reservoir | sodium cacodylate | 0.1 (M) | pH6.5 |
3 | 1 | reservoir | 0.2 (M) | ||
4 | 1 | reservoir | PEG5000 MME | 20-25 (%) |