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1E7D

Endonuclease VII (ENDOVII) Ffrom Phage T4

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsENRAF-NONIUS
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date1999-01-15
DetectorMARRESEARCH
Spacegroup nameP 1 21 1
Unit cell lengths60.900, 37.400, 74.000
Unit cell angles90.00, 108.20, 90.00
Refinement procedure
Resolution27.000

*

- 2.800
R-factor0.245

*

Rwork0.245
R-free0.31500
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1e7l
RMSD bond length0.011

*

RMSD bond angle2.300

*

Data reduction softwareXDS
Data scaling softwareSCALA
Phasing softwareAMoRE
Refinement softwareREFMAC
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]44.2812.900
High resolution limit [Å]2.8002.800
Rmerge0.096

*

0.283

*

Total number of observations28458

*

Number of reflections8966
<I/σ(I)>7.23.2
Completeness [%]99.899.7
Redundancy3.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.24

*

HANGING DROP VAPOUR DIFFUSION DROP SIZE: 1 + 1 UL PROTEIN SOLUTION: 16 MG/ML ENDOVII, 175 MM NACL, 20 MM MGCL2, 2 MM ZNCL2, 10 MM 2-MERCAPTO-ETHANOL, 10 % GLYCEROL, 10 MM MOPS PH6.5. WELL: 16-18% PEG 5000 MME, 200 MM CACL2, 20 MM AMMONIUM SULPHATE, 10 MM 2-MERCAPTO-ETHANOL, 100 MM TRIS PH 8.2, C.A. 1 MM SODIUM AZIDE
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein16 (mg/ml)
21reservoirPEG2000 MME18 (%(w/v))
31reservoirTris100 (mM)
41reservoir200 (mM)
51reservoirammonium sulfate5 (mM)
61reservoir5 (mM)
71reservoirbeta-mercaptoethanol10 (mM)

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PDB entries from 2024-10-30

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