1E4X
crossreactive binding of a circularized peptide to an anti-TGFalpha antibody Fab-fragment
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | MPG/DESY, HAMBURG BEAMLINE BW6 |
Synchrotron site | MPG/DESY, HAMBURG |
Beamline | BW6 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 1999-06-17 |
Detector | XRAY RESEARCH |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 173.820, 45.090, 120.410 |
Unit cell angles | 90.00, 99.13, 90.00 |
Refinement procedure
Resolution | 20.000 - 1.900 |
R-factor | 0.245 * |
Rwork | 0.245 |
R-free | 0.31100 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | TAB2 |
RMSD bond length | 0.013 |
RMSD bond angle | 0.036 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | AMoRE |
Refinement software | REFMAC |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 | 1.970 |
High resolution limit [Å] | 1.900 | 1.900 |
Rmerge | 0.038 | 0.257 |
Number of reflections | 68086 | |
<I/σ(I)> | 29.7 | 2.4 |
Completeness [%] | 92.9 | 82.8 |
Redundancy | 5.2 | 1.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion, hanging drop * | 8.5 | PROTEIN IN TRIS-HCL, 8.5, 6-10 MG/ML PRECIPITANT: 12% PEG 8000, 20 MM NA-ACETATE, pH 8.50 |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 6-10 (mg/ml) | |
2 | 1 | reservoir | PEG8000 | 12 (%) | |
3 | 1 | reservoir | sodium acetate | 20 (mM) |