1DUD
DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDE HYDROLASE (D-UTPASE) COMPLEXED WITH THE SUBSTRATE ANALOGUE DEOXYURIDINE 5'-DIPHOSPHATE (D-UDP)
Experimental procedure
| Source type | ROTATING ANODE |
| Source details | RIGAKU RUH2R |
| Detector technology | AREA DETECTOR |
| Detector | SIEMENS |
| Spacegroup name | H 3 |
| Unit cell lengths | 86.640, 86.640, 62.230 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 10.000 - 2.300 |
| R-factor | 0.2 |
| Rwork | 0.200 |
| RMSD bond length | 0.017 |
| RMSD bond angle | 27.900 * |
| Data reduction software | XDS |
| Phasing software | X-PLOR (3.1) |
| Refinement software | X-PLOR (3.1) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 4.480 * | |
| High resolution limit [Å] | 2.250 | 2.250 * |
| Rmerge | 0.072 | 0.304 * |
| Total number of observations | 33369 * | |
| Number of reflections | 7520 | |
| Completeness [%] | 67.0 | 35 * |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | Batch method * | 4.5 * | 20 * |
Crystallization Reagents in Literatures
| ID | crystal ID | solution | reagent name | concentration (unit) | details |
| 1 | 1 | 1 | enzyme | 3.4 (mg/ml) | |
| 2 | 1 | 1 | succinate | 7 (mM) | |
| 3 | 1 | 1 | PEG8000 | 1.5 (%) |






