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1DGD

AN ALKALI METAL ION SIZE-DEPENDENT SWITCH IN THE ACTIVE SITE STRUCTURE OF DIALKYLGLYCINE DECARBOXYLASE

Experimental procedure
Spacegroup nameP 64 2 2
Unit cell lengths152.700, 152.700, 86.600
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution8.000 - 2.800
R-factor0.178
RMSD bond length0.012
RMSD bond angle2.600
Refinement softwareTNT
Data quality characteristics
 Overall
High resolution limit [Å]2.800

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Rmerge0.100

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Total number of observations80899

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Number of reflections14859

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Completeness [%]98.2

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Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, hanging drop

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7.5

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referred to J.Mol.Biol. 222.873-875 1991

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Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein20-60 (mg/ml)
101reservoirsodium azide0.02 (%)
21droppotassium phosphate5 (mM)
31dropPLP0.015 (mM)
41dropsodium azide0.02 (%(w/v))
51reservoirPEG400015 (%(w/v))
61reservoirmorpholinoethanesulfonic acid15 (mM)
71reservoirpotassium hydroxideto neutralize
81reservoirsodium pyruvate75-150 (mM)
91reservoirPLP0.015 (mM)

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PDB entries from 2024-04-24

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