Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1DEL

DEOXYNUCLEOSIDE MONOPHOSPHATE KINASE COMPLEXED WITH DEOXY-GMP AND AMP

Experimental procedure
Source typeSYNCHROTRON
Source detailsEMBL/DESY, HAMBURG BEAMLINE X11
Synchrotron siteEMBL/DESY, HAMBURG
BeamlineX11
Temperature [K]277
Detector technologyIMAGE PLATE
Collection date1995-04-01
DetectorMAR scanner 180 mm plate
Spacegroup nameC 1 2 1
Unit cell lengths155.200, 58.500, 75.700
Unit cell angles90.00, 108.10, 90.00
Refinement procedure
Resolution10.000 - 2.200
R-factor0.173

*

Rwork0.186
RMSD bond length0.014
RMSD bond angle0.027

*

Data reduction softwareDENZO
Refinement softwarePROLSQ
Data quality characteristics
 Overall
Low resolution limit [Å]10.000
High resolution limit [Å]2.200
Rmerge0.065
Total number of observations96619

*

Number of reflections31836
Completeness [%]96.5
Redundancy3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, hanging drop

*

7.6

*

4

*

pH 6.5
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein10 (mg/ml)
21dropTris-HCl20 (mM)
31dropDTT7 (mM)
41dropdGMP5 (mM)
51reservoirPEG400011-14 (%(v/v))
61reservoirmagnesium acetate200 (mM)
71reservoirDTT7 (mM)
81reservoirdioxane2 (%)
91reservoircacodylate100 (mM)

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon