1D3U
TATA-BINDING PROTEIN/TRANSCRIPTION FACTOR (II)B/BRE+TATA-BOX COMPLEX FROM PYROCOCCUS WOESEI
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 1998-12-08 |
Detector | CUSTOM-MADE |
Spacegroup name | I 21 3 |
Unit cell lengths | 174.200, 174.200, 174.200 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 20.000 - 2.400 |
R-factor | 0.212 |
Rwork | 0.206 |
R-free | 0.24500 |
RMSD bond length | 0.012 |
RMSD bond angle | 1.600 |
Data reduction software | HKL-2000 |
Data scaling software | SCALA |
Phasing software | CNS |
Refinement software | CNS |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 28.300 | 2.530 |
High resolution limit [Å] | 2.400 | 2.400 |
Rmerge | 0.068 | 0.339 |
Number of reflections | 33982 | |
<I/σ(I)> | 7.3 | |
Completeness [%] | 99.2 | 99.2 |
Redundancy | 5.2 | 4.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 * | 19 * | PEG 400, STRONTIUM CHLORIDE, SODIUM CITRATE, TRIS, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 292K |
Crystallization Reagents
ID | crystal ID | solution ID | reagent name | concentration | details |
1 | 1 | 1 | SRCL2 | ||
2 | 1 | 1 | SODIUM CITRATE | ||
3 | 1 | 1 | TRIS | ||
4 | 1 | 1 | PEG 400 | ||
5 | 1 | 2 | PEG 400 |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | TBP | 0.4 (mM) | |
2 | 1 | drop | TFB | 0.4 (mM) | |
3 | 1 | drop | DNA | 0.6 (mM) | |
4 | 1 | drop | potassium acetate | 200 (mM) | |
5 | 1 | drop | HEPES | 50 (mM) | |
6 | 1 | reservoir | PEG400 | 30 (%(w/v)) | |
7 | 1 | reservoir | SrCl2 | 25 (mM) | |
8 | 1 | reservoir | sodium citrate | 200 (mM) | |
9 | 1 | reservoir | Tris | 50 (mM) |