1CM9
CRYSTAL STRUCTURE OF VIRAL MACROPHAGE INFLAMMATORY PROTEIN-II
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X4A |
Synchrotron site | NSLS |
Beamline | X4A |
Temperature [K] | 123 |
Detector technology | IMAGE PLATE |
Collection date | 1998-08 |
Detector | RIGAKU RAXIS IV |
Wavelength(s) | 0.9793, 0.9790, 0.9871 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 70.250, 57.610, 49.560 |
Unit cell angles | 90.00, 130.85, 90.00 |
Refinement procedure
Resolution | 30.000 - 2.100 |
R-factor | 0.24 |
Rwork | 0.240 |
R-free | 0.27500 |
Structure solution method | MAD |
RMSD bond length | 0.007 |
RMSD bond angle | 1.311 |
Data scaling software | SCALEPACK |
Phasing software | SOLVE |
Refinement software | CNS |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | |
High resolution limit [Å] | 2.100 | 2.100 * |
Rmerge | 0.083 * | 0.381 * |
Number of reflections | 8259 | |
Completeness [%] | 92.8 | |
Redundancy | 2.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion, hanging drop * | 5.6 | used seeding, Fernandez, E,J., (2000) J.Appl.Crystallogr., 33, 168. * |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 12 (mg/ml) | |
2 | 1 | reservoir | PEG4000 | 11 (%) | |
3 | 1 | reservoir | 2-propanol | 11 (%) | |
4 | 1 | reservoir | sodium citrate | 0.1 (M) |