1CD0
STRUCTURE OF HUMAN LAMDA-6 LIGHT CHAIN DIMER JTO
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU RU200 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 1997-10 |
Detector | RIGAKU |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 42.900, 60.500, 73.400 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 8.000 - 1.900 |
Rwork | 0.184 |
R-free | 0.24000 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | MCG(PDBCODE:1DCL): VL DIMER WITH WITH CDR LOOPS DELETED. |
RMSD bond length | 0.006 |
RMSD bond angle | 26.300 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | AMoRE |
Refinement software | CNS (0.3) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 1.940 |
High resolution limit [Å] | 1.900 | 1.900 |
Rmerge | 0.076 | 0.311 |
Number of reflections | 15655 | |
<I/σ(I)> | 13.5 | 3.3 |
Completeness [%] | 95.0 | 89.8 |
Redundancy | 4.87 | 3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion * | 6.5 | 27.5% PEG6000, 0.08 M SODIUM CACODYLATE PH 6.5, 0.1 M SODIUM ACETATE |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | reservoir | ammonium sulfate | ||
2 | 1 | reservoir | PEG6000 |