Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

1C8C

CRYSTAL STRUCTURES OF THE CHROMOSOMAL PROTEINS SSO7D/SAC7D BOUND TO DNA CONTAINING T-G MISMATCHED BASE PAIRS

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU RU200
Temperature [K]123
Detector technologyIMAGE PLATE
Collection date1998-08-15
DetectorRIGAKU RAXIS IIC
Spacegroup nameP 21 21 21
Unit cell lengths47.475, 49.800, 37.681
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution8.000 - 1.450
R-factor0.229
R-free0.28680
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1azp
RMSD bond length0.009

*

RMSD bond angle2.300

*

Phasing softwareAMoRE
Refinement softwareSHELXL-97
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.000
High resolution limit [Å]1.3801.450

*

Rmerge0.054
Number of reflections14498
Completeness [%]89.163

*

Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, sitting drop

*

6.5PROTEIN WAS CRYSTALLIZED FROM 1.3MM SSO7D, 1.3MM DUPLEX DNA, 2.5 MM TRIS (PH 6.5), 2.5% PEG 400, EQUILIBRATED AGAINST 15% PEG 400 at pH 6.5, VAPOR DIFFUSION, HANGING DROP
Crystallization Reagents
IDcrystal IDsolution IDreagent nameconcentrationdetails
111TRIS
211PEG 400
312PEG 400
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropSso7d1.3 (mM)
21dropDNA duplex1.3 (mM)
31dropTris-HCl2.5 (mM)
41dropPEG4002.5 (%)
51reservoirPEG40015 (%)

237423

PDB entries from 2025-06-11

PDB statisticsPDBj update infoContact PDBjnumon