1C4O
CRYSTAL STRUCTURE OF THE DNA NUCLEOTIDE EXCISION REPAIR ENZYME UVRB FROM THERMUS THERMOPHILUS
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 138 |
Detector technology | CCD |
Collection date | 1999-06-01 |
Detector | SBC |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 134.740, 134.740, 106.700 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 41.900 - 1.500 |
R-factor | 0.252 |
Rwork | 0.252 |
R-free | 0.26600 |
Structure solution method | SIRAS |
RMSD bond length | 0.012 |
RMSD bond angle | 23.000 * |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | CNS (0.5) |
Refinement software | CNS |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 41.820 | 1.530 |
High resolution limit [Å] | 1.500 | 1.500 |
Rmerge | 0.070 | 0.729 |
Number of reflections | 176690 | |
<I/σ(I)> | 26 | 1.3 |
Completeness [%] | 99.6 | 93.3 |
Redundancy | 7.5 | 3.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 * | 293 | Shibata, A., (1999) Acta Crystallogr.D55, 704. * |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 14 (mg/ml) | |
2 | 1 | drop | beta-mercaptoehtanol | 10 (mM) | |
3 | 1 | drop | EDTA | 1 (mM) | |
4 | 1 | drop | glycerol | 10 (%(v/v)) | |
5 | 1 | drop | Tris-HCl | 50 (mM) | |
6 | 1 | reservoir | lithium sulfate | 1.78 (M) | |
7 | 1 | reservoir | beta-octylglucoside | 0.5 (%(w/v)) | |
8 | 1 | reservoir | MES | 100 (mM) |